BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H06SP1|AL425942
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1564 0.0
>3x_Contig1786
Length = 33838
Score = 1564 bits (789), Expect = 0.0
Identities = 789/789 (100%)
Strand = Plus / Plus
Query: 1 gatcttggatgaaaaaacagtagaagatattttcaactctgggttctctagaattcctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26615 gatcttggatgaaaaaacagtagaagatattttcaactctgggttctctagaattcctat 26674
Query: 61 ttatctaccaggtcaacctaccaattacattgggatgcttttagtccgtgtgttgatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26675 ttatctaccaggtcaacctaccaattacattgggatgcttttagtccgtgtgttgatttc 26734
Query: 121 atacgatcccgacgattgcctacctgtatcccatttccctctggctacattgcctgaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26735 atacgatcccgacgattgcctacctgtatcccatttccctctggctacattgcctgaaac 26794
Query: 181 agctccacaaacgtcttgtctaaatattctaaattacttccaagagggaaaatctcatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26795 agctccacaaacgtcttgtctaaatattctaaattacttccaagagggaaaatctcatat 26854
Query: 241 gtgcgtagtgtctagggatccaggttctagttctggtgccattggacttgtcactttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26855 gtgcgtagtgtctagggatccaggttctagttctggtgccattggacttgtcactttgga 26914
Query: 301 agatgtcattgaagaattgattggtgaagaaatcgtggatgaatctgacgttttcgtcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26915 agatgtcattgaagaattgattggtgaagaaatcgtggatgaatctgacgttttcgtcga 26974
Query: 361 tatccatcaacggatcatgagagatcaaccaggaccactatcaaagaggcacatcacttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26975 tatccatcaacggatcatgagagatcaaccaggaccactatcaaagaggcacatcacttc 27034
Query: 421 ctatttgcattcattgtacactagaaaaccatcagaaactcaaccgcttgtgaatgaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27035 ctatttgcattcattgtacactagaaaaccatcagaaactcaaccgcttgtgaatgaaaa 27094
Query: 481 tgcggaaagcagtgaggcgtccggcaaaaatgaaaccacaaactacctgtcagtaggcgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27095 tgcggaaagcagtgaggcgtccggcaaaaatgaaaccacaaactacctgtcagtaggcgc 27154
Query: 541 aacgaattttcagcccgcaaacccagccgcgaaccctttagatataaagaaacctttcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27155 aacgaattttcagcccgcaaacccagccgcgaaccctttagatataaagaaacctttcgt 27214
Query: 601 gaccataaaaaggcaaagttatggcgggatgtccaggactcctccacggctttcttctga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27215 gaccataaaaaggcaaagttatggcgggatgtccaggactcctccacggctttcttctga 27274
Query: 661 gccaatttctcctgcaacaagtgtgattgaaacaacctcccctataagacgtgaacctga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27275 gccaatttctcctgcaacaagtgtgattgaaacaacctcccctataagacgtgaacctga 27334
Query: 721 cgccatttcacccgtgggaagcgctcctacaaccgatgaaaaaaggaagtatgtatccca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27335 cgccatttcacccgtgggaagcgctcctacaaccgatgaaaaaaggaagtatgtatccca 27394
Query: 781 tcataacca 789
|||||||||
Sbjct: 27395 tcataacca 27403
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5238
Number of Sequences: 1807
Number of extensions: 5238
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)